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| ScintArchive () |
| | Default constructor.
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| ScintArchive (const ScintArchive &archive) |
| | Copy constructor.
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| ~ScintArchive () |
| | Destructor.
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const ScintArchive & | operator= (const ScintArchive &archive) |
| | Assignment operator.
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void | copy (const Archive &archive) |
| | Copy all of the class attributes and the selected Integration data.
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virtual ScintArchive * | clone () const |
| | Return a pointer to a new copy constructed instance equal to this.
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const std::vector< float > & | get_passband (unsigned channel) const |
| | Return a reference to the bandpass in the given channel.
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bool | takes (const ScintArchive *archive) const |
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void | integrate (const ScintArchive *archive) |
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| TimerArchive () |
| | Default constructor.
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| TimerArchive (const TimerArchive &archive) |
| | Copy constructor.
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| ~TimerArchive () |
| | Destructor.
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const TimerArchive & | operator= (const TimerArchive &archive) |
| | Assignment operator.
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| TimerArchive (const Archive &archive) |
| | Base copy constructor.
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void | copy (const Archive &archive) |
| | Copy all of the class attributes and the selected Integration data.
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TimerArchive * | clone () const |
| | Return a pointer to a new copy constructed instance equal to this.
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virtual std::string | get_telescope () const |
| | Get the telescope name.
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virtual void | set_telescope (const std::string &telescope) |
| | Set the telescope name.
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virtual Signal::State | get_state () const |
| | Get the state of the profiles.
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virtual void | set_state (Signal::State state) |
| | Set the state of the profiles.
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virtual Signal::Scale | get_scale () const |
| | Get the scale of the profiles.
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virtual void | set_scale (Signal::Scale scale) |
| | Set the scale of the profiles.
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virtual Signal::Source | get_type () const |
| | Get the observation type (psr, cal)
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virtual void | set_type (Signal::Source type) |
| | Set the observation type (psr, cal)
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virtual std::string | get_source () const |
| | Get the source name.
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virtual void | set_source (const std::string &source) |
| | Set the source name.
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virtual sky_coord | get_coordinates () const |
| | Get the coordinates of the source.
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virtual void | set_coordinates (const sky_coord &coordinates) |
| | Set the coordinates of the source.
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| virtual unsigned | get_nbin () const |
| | Get the number of pulsar phase bins used. More...
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| virtual unsigned | get_nchan () const |
| | Get the number of frequency channels used. More...
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| virtual unsigned | get_npol () const |
| | Get the number of frequency channels used. More...
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| virtual unsigned | get_nsubint () const |
| | Get the number of sub-integrations stored in the file. More...
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virtual double | get_bandwidth () const |
| | Get the overall bandwidth of the observation.
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virtual void | set_bandwidth (double bw) |
| | Set the overall bandwidth of the observation.
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virtual double | get_centre_frequency () const |
| | Get the centre frequency of the observation.
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virtual void | set_centre_frequency (double cf) |
| | Set the centre frequency of the observation.
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| virtual double | get_dispersion_measure () const |
| | Get the dispersion measure (in  ) More...
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| virtual void | set_dispersion_measure (double dm) |
| | Set the dispersion measure (in ) More...
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virtual double | get_rotation_measure () const |
| | Get the rotation measure (in  )
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virtual void | set_rotation_measure (double rm) |
| | Set the rotation measure (in )
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virtual bool | get_dedispersed () const |
| | Inter-channel dispersion delay has been removed.
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virtual void | set_dedispersed (bool done=true) |
| | Set true when the inter-channel dispersion delay has been removed.
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virtual bool | get_faraday_corrected () const |
| | Data has been corrected for ISM faraday rotation.
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virtual void | set_faraday_corrected (bool done=true) |
| | Set the status of the ISM RM flag.
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virtual bool | get_poln_calibrated () const |
| | Data has been poln calibrated.
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virtual void | set_poln_calibrated (bool done=true) |
| | Set the status of the poln calibrated flag.
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int | hydra_obstype () |
| | Returns the Hydra observation type, given the coordinates.
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| Archive () |
| | Default constructor.
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| | Archive (const Archive &archive) |
| | Copy constructor. More...
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virtual | ~Archive () |
| | Destructor.
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| Archive & | operator= (const Archive &a) |
| | Assignment operator. More...
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| template<class T > |
| const T * | get () const |
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| template<class T > |
| T * | get () |
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| template<class T > |
| T * | getadd () |
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void | copy (const Archive &) |
| | Copy all base class attributes, Extensions, and Integrations.
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void | copy (const Archive *) |
| | Copy all base class attributes, Extensions, and Integrations.
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| Archive * | total (bool tscrunch=true) const |
| | Return pointer to a new fscrunched, tscrunched and pscrunched clone. More...
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| Archive * | tscrunched () const |
| | Return pointer to a new tscrunched clone. More...
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Archive * | extract (std::vector< unsigned > &subints) const |
| | Return pointer to a new instance with only the specified subints.
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| Profile * | get_Profile (unsigned subint, unsigned pol, unsigned chan) |
| | Return pointer to the specified profile. More...
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const Profile * | get_Profile (unsigned subint, unsigned pol, unsigned chan) const |
| | Return pointer to the specified profile.
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| void | set_ephemeris (const Parameters *ephemeris, bool update=true) |
| | Install the given ephemeris and call update_model. More...
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const Parameters * | get_ephemeris () const |
| | Return a pointer to the current archive ephemeris.
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bool | has_ephemeris () const |
| | Return true if the Archive has an ephemeris.
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void | set_model (const Predictor *model, bool apply=true) |
| | Install the given predictor and shift profiles to align.
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const Predictor * | get_model () const |
| | Return a pointer to the current phase predictor.
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bool | has_model () const |
| | Returns true if the Archive has a model.
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| void | update_model () |
| | Create a new predictor and align the Integrations to the new model. More...
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| void | bscrunch (unsigned nscrunch) |
| | Integrate pulse profiles in phase. More...
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| void | fold (unsigned nfold) |
| | Integrate neighbouring sections of the pulse profiles. More...
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| void | pscrunch () |
| | Integrate profiles in polarization. More...
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| void | fscrunch (unsigned nscrunch=0) |
| | Integrate profiles in frequency. More...
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| void | tscrunch (unsigned nscrunch=0) |
| | Integrate profiles in time. More...
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void | rotate (double time) |
| | Phase rotate each profile by time seconds.
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void | rotate_phase (double phase) |
| | Rotate each profile by phase.
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| void | append (const Archive *archive) |
| | Append the Integrations from the specifed archive. More...
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void | remove_chan (unsigned first, unsigned last) |
| | Delete the specified inclusive channel range from the Archive.
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void | update_centre_frequency () |
| | Update the centre frequency.
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| void | centre (double phase_offset=0.5) |
| | Phase rotate pulsar Integrations so that pulse phase zero is centred. More...
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| void | centre_max_bin (double phase_offset=0.5) |
| | Phase rotate pulsar Integrations so centre the maximum amplitude. More...
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| void | convert_state (Signal::State state) |
| | Convert data to the specified state. More...
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Signal::Basis | get_basis () const |
| | Convenience interface to Receiver::get_basis.
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| void | dedisperse () |
| | Rotate the Profiles to remove dispersion delays b/w chans. More...
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| void | defaraday () |
| | Correct the Faraday rotation of Q into U. More...
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void | transform (const Jones< float > &) |
| | Perform the transformation on each polarimetric profile.
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void | transform (const std::vector< Jones< float > > &) |
| | Perform frequency response on each polarimetric profile.
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void | transform (const std::vector< std::vector< Jones< float > > > &) |
| | Perform the time and frequency response on each polarimetric profile.
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void | invint () |
| | Transform Stokes I,Q,U,V into the polarimetric invariant interval.
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PhaseWeight * | baseline () const |
| | Return a new PhaseWeight instance with the baseline phase bins masked.
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void | remove_baseline () |
| | Remove the baseline from all profiles.
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void | uniform_weight (float new_weight=1.0) |
| | Set the weight of each profile to the given number.
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bool | standard_match (const Archive *arch, std::string &reason) const |
| | Test if arch matches (enough for a pulsar - standard match)
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bool | calibrator_match (const Archive *arch, std::string &reason) const |
| | Test if arch matches (enough for a pulsar - calibrator match)
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bool | processing_match (const Archive *arch, std::string &reason) const |
| | Test if arch matches (enough for a pulsar - pulsar match)
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bool | mixable (const Archive *arch, std::string &reason) const |
| | Test if arch is mixable (enough for append)
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| double | weighted_frequency (unsigned ichan, unsigned start, unsigned end) const |
| | Computes the weighted channel frequency over an Integration interval. More...
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| void | bscrunch_to_nbin (unsigned new_nbin) |
| | Call bscrunch with the appropriate value. More...
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| void | fscrunch_to_nchan (unsigned new_nchan) |
| | Call fscrunch with the appropriate value. More...
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| void | tscrunch_to_nsub (unsigned new_nsub) |
| | Call tscrunch with the appropriate value. More...
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MJD | start_time () const |
| | Return the MJD at the start of the first sub-integration.
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MJD | end_time () const |
| | Return the MJD at the end of the last sub-integration.
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double | integration_length () const |
| | Returns the total time integrated into all Integrations (in seconds)
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bool | type_is_cal () const |
| | Return true if the observation is a calibrator.
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| void | find_transitions (int &hi2lo, int &lo2hi, int &buffer) const |
| | Find the transitions between high and low states in total intensity. More...
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| void | find_peak_edges (int &rise, int &fall) const |
| | Find the bins in which the total intensity exceeds a threshold. More...
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| float | find_max_phase () const |
| | Returns the centre phase of the region with maximum total intensity. More...
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| float | find_min_phase (float dc=0.15) const |
| | Returns the centre phase of the region with minimum total intensity. More...
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| float | rms_baseline (float dc=0.4) |
| | Returns geometric mean of baseline RMS for each Integration. More...
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virtual Interface * | get_interface () |
| | Return a text interface that can be used to access this instance.
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| void | unload (const char *filename=0) const |
| | Write the archive to filename. More...
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void | unload (const std::string &filename) const |
| | Convenience interface to Archive::unload (const char*)
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std::string | get_filename () const |
| | Get the name of the file to which the archive will be unloaded.
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| void | set_filename (const std::string &filename) |
| | Set the filename of the Archive. More...
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void | update () |
| | Update the current archive, saving current Integration data.
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void | refresh () |
| | Completely reload the archive, deleting all data.
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| virtual void | resize (unsigned nsubint, unsigned npol=0, unsigned nchan=0, unsigned nbin=0) |
| | Resize the Integration vector with new_Integration instances. More...
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virtual void | erase (unsigned isubint) |
| | Remove the specified sub-integration.
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void | reverse_chan () |
| | Reverse the order of frequency channels.
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virtual unsigned | get_nextension () const |
| | Return the number of extensions available.
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| virtual const Extension * | get_extension (unsigned iextension) const |
| | Return a pointer to the specified extension. More...
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| virtual Extension * | get_extension (unsigned iextension) |
| | Return a pointer to the specified extension. More...
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template<class ExtensionType > |
| const ExtensionType * | get () const |
| | Template method searches for an Extension of the specified type.
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template<class ExtensionType > |
| ExtensionType * | get () |
| | Template method searches for an Extension of the specified type.
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template<class ExtensionType > |
| ExtensionType * | getadd () |
| | Template method returns an Extension of the specified type.
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| virtual void | add_extension (Extension *extension) |
| | Add an Extension to the Archive instance. More...
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Expert * | expert () |
| | Provide access to the expert interface.
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const Expert * | expert () const |
| | The default baseline removal strategy.
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const Match * | get_standard_match () const |
| | Policy determines if a standard/template matches an observation.
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void | set_standard_match (Match *) |
| | The default baseline removal strategy.
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const Match * | get_calibrator_match () const |
| | Policy determines if a calibrator matches an observation.
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void | set_calibrator_match (Match *) |
| | The default baseline removal strategy.
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const Match * | get_processing_match () const |
| | Policy determines if data were processed identically.
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void | set_processing_match (Match *) |
| | The default baseline removal strategy.
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const Match * | get_mixable () const |
| | Policy determines if data can be combined/integrated.
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void | set_mixable (Match *) |
| | The default baseline removal strategy.
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StrategySet * | get_strategy () const |
| | Returns the strategy manager.
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| IntegrationManager () |
| | null constructor
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| IntegrationManager (const IntegrationManager &archive) |
| | copy constructor
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IntegrationManager & | operator= (const IntegrationManager &archive) |
| | operator =
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virtual | ~IntegrationManager () |
| | destructor
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| Integration * | get_Integration (unsigned subint) |
| | Return pointer to the specified Integration. More...
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Integration * | get_last_Integration () |
| | Return a pointer to the last Integration.
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Integration * | get_first_Integration () |
| | Return a pointer to the first Integration.
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const Integration * | get_Integration (unsigned subint) const |
| | Return const pointer to the specified Integration.
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const Integration * | get_last_Integration () const |
| | Return a const pointer to the last Integration.
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const Integration * | get_first_Integration () const |
| | Return a const pointer to the first Integration.
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template<class StrictWeakOrdering > |
| void | sort (StrictWeakOrdering comp=temporal_order) |
| | Sort the Integrations according to the specified order.
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void | shuffle () |
| | Randomly rearrange the sub-integrations.
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| Expert * | expert () |
| | Provide access to the expert interface. More...
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| Able (const Able &) |
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Able & | operator= (const Able &) |
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unsigned | get_reference_count () const |
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| HeapTracked (const HeapTracked &) |
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HeapTracked & | operator= (const HeapTracked &) |
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bool | __is_on_heap () const |
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void | init_spectra () |
| | Update the spectra attribute.
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void | backend_load (FILE *fptr) |
| | Load ScintArchive specific information.
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void | backend_unload (FILE *fptr) const |
| | Unload ScintArchive specific information.
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void | correct () |
| | Over-ride TimerArchive::correct.
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void | set_be_data_size () |
| | set the backend data size
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virtual void | load_header (const char *filename) |
| | Load the header information from filename.
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| virtual Integration * | load_Integration (const char *filename, unsigned subint) |
| | Load the specified Integration from filename, returning new instance. More...
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bool | can_unload () const |
| | The unload_file method is implemented.
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virtual void | unload_file (const char *filename) const |
| | Unload the Archive (header and Integration data) to filename.
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virtual void | set_nbin (unsigned numbins) |
| | Set the number of pulsar phase bins.
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virtual void | set_nchan (unsigned numchan) |
| | Set the number of frequency channels.
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virtual void | set_npol (unsigned numpol) |
| | Set the number of polarization measurements.
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virtual void | set_nsubint (unsigned nsubint) |
| | Set the number of sub-integrations.
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| virtual Integration * | new_Integration (const Integration *copy_this=0) |
| | The subints vector will point to TimerIntegrations. More...
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void | set_corrected (int code, bool done) |
| | set code bit in hdr.corrected
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void | set_calibrated (int code, bool done) |
| | set code bit in hdr.calibrated
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void | load (FILE *fptr) |
| | load the archive from an open file
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void | unload (FILE *fptr) const |
| | unload the archive to an open file
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void | hdr_load (FILE *fptr) |
| | load the timer header from an open file
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void | psr_load (FILE *fptr) |
| | load the polyco and ephemeris from an open file
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void | subint_load (FILE *fptr) |
| | load the sub-integrations from an open file
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void | hdr_unload (FILE *fptr) const |
| | unload the timer header to an open file
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void | psr_unload (FILE *fptr) const |
| | unload the polyco and ephemeris from an open file
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void | subint_unload (FILE *fptr) const |
| | unload the sub-integrations to an open file
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void | correct_Integrations () |
| | Set the state of various redundant parameters in the mini headers.
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void | unpack_extensions () |
| | Unpack the Receiver and Telescope Extension classes (after loading)
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void | pack_extensions () |
| | Pack the Receiver and Telescope Extension classes (before unloading)
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void | unpack (Receiver *receiver) |
| | Unpack the Receiver extension.
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void | pack (const Receiver *receiver) |
| | Pack the Receiver extension.
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void | unpack (TapeInfo *tape) |
| | Unpack the TapeInfo extension.
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void | pack (const TapeInfo *tape) |
| | Pack the TapeInfo extension.
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void | unpack (CalInfoExtension *cal) |
| | Unpack the CalInfoExtension.
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Integration * | use_Integration (Integration *) |
| | Return the given Integration ready for use.
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| void | init_Integration (Integration *subint, bool check_phase=false) |
| | Initialize an Integration to reflect Archive attributes. More...
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void | resize_Integration (Integration *integration) |
| | Provide Integration::resize access to Archive-derived classes.
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| void | apply_model (Integration *subint, const Predictor *old=0) |
| | Apply the current model to the Integration. More...
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| void | update_model (unsigned old_nsubint, bool clear_model=false) |
| | Update the predictor model and correct the Integration set. More...
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void | update_model (const MJD &time, bool clear_model=false) |
| | Update the predictor to include the specifed MJD.
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| void | create_updated_model (bool clear_model) |
| | Creates polynomials to span the Integration set. More...
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| bool | good_model (const Predictor *test_model) const |
| | Returns true if the given model spans the Integration set. More...
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bool | zero_phase_aligned () const |
| | Return true if all Integration::zero_phase_aligned flags are set.
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| virtual void | _resize (unsigned nsubint, bool instances=true) |
| | Resize the Integration vector. More...
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void | append (const IntegrationManager *more_subints) |
| | Append new_Integration copies of Integration objects to self.
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void | manage (IntegrationManager *more_subints) |
| | Append use_Integration modifications of Integration objects to self.
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void | manage (Integration *integration) |
| | Directly append the Integration instance (no copy)
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void | insert (unsigned isubint, Integration *integration) |
| | Insert the Integration instance into the specified location.
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void | unmanage (const Integration *) |
| | Remove the Integration instance.
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void | unmanage (unsigned isubint) |
| | Remove the Integration at the specified index.
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void | load_all () |
| | Load all sub-integrations.
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Handle * | __reference (bool active) const |
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void | __dereference (bool auto_delete=true) const |
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